Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AL450468.2-201ENST00000565955 1889 ntBASIC21.03■□□□□ 0.96
VPS8Q8N3P4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 HLA-DPA2-205ENST00000433582 733 ntBASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 HNRNPA3P6-201ENST00000472163 1006 ntBASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AP005212.2-201ENST00000584979 510 ntBASIC21.03■□□□□ 0.96
VPS8Q8N3P4 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 MDC1-209ENST00000613547 830 ntTSL 5 BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VPS8Q8N3P4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 NME6-208ENST00000435684 599 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC21.02■□□□□ 0.96
VPS8Q8N3P4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 AC020931.1-201ENST00000589622 1346 ntBASIC21.02■□□□□ 0.95
VPS8Q8N3P4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VPS8Q8N3P4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 AC115284.2-201ENST00000624646 2054 ntBASIC21.01■□□□□ 0.95
VPS8Q8N3P4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 AC083801.1-201ENST00000491689 358 ntBASIC21.01■□□□□ 0.95
VPS8Q8N3P4 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS8Q8N3P4 PCDHA3-202ENST00000532566 4594 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms