Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RNF135Q8IUD6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 OR52M2P-201ENST00000414298 959 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 RHOQP2-201ENST00000449922 579 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 CES1P2-201ENST00000566467 1242 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 TYMSP2-201ENST00000589501 424 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MIR6074-201ENST00000612054 107 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC090510.3-201ENST00000615831 821 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MIR6125-201ENST00000618986 96 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC090386.2-201ENST00000623010 1039 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MEX3B-202ENST00000558133 4333 ntBASIC14.67□□□□□ -0.06
RNF135Q8IUD6 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF135Q8IUD6 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC008536.3-201ENST00000623282 1599 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC006987.1-201ENST00000413610 527 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 PPP1R2P4-201ENST00000424051 595 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 RN7SL846P-201ENST00000467429 292 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC080013.5-201ENST00000607044 679 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 AC139713.2-207ENST00000641556 1292 ntBASIC14.66□□□□□ -0.06
RNF135Q8IUD6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms