Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 RN7SL181P-201ENST00000462921 277 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 HERC2P11-201ENST00000562845 725 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC100756.2-201ENST00000569537 736 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AC084781.1-201ENST00000613737 656 ntBASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TTC39BQ5VTQ0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 MIR33B-201ENST00000385104 96 ntBASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 RPL7P35-201ENST00000446943 740 ntBASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AC095040.1-201ENST00000513286 675 ntBASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SNORD3B-1-201ENST00000577988 758 ntBASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 YRDCP1-201ENST00000621419 643 ntBASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 BEND3P3-201ENST00000611030 2440 ntBASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.4□□□□□ -0.1
TTC39BQ5VTQ0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TTC39BQ5VTQ0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 AL355102.3-201ENST00000554299 1678 ntBASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TTC39BQ5VTQ0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms