Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC12.44□□□□□ -0.42
CDK5Q00535 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CDK5Q00535 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CDK5Q00535 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.43□□□□□ -0.42
CDK5Q00535 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDK5Q00535 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 RNA5SP359-201ENST00000364838 113 ntBASIC12.43□□□□□ -0.42
CDK5Q00535 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 MIR663B-201ENST00000408361 115 ntBASIC12.43□□□□□ -0.42
CDK5Q00535 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC104073.2-201ENST00000453737 312 ntBASIC12.43□□□□□ -0.42
CDK5Q00535 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC106794.1-201ENST00000506935 792 ntBASIC12.43□□□□□ -0.42
CDK5Q00535 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.43□□□□□ -0.42
CDK5Q00535 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.43□□□□□ -0.42
CDK5Q00535 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.43□□□□□ -0.42
CDK5Q00535 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 NDUFB10P1-201ENST00000567319 521 ntBASIC12.43□□□□□ -0.42
CDK5Q00535 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.43□□□□□ -0.42
CDK5Q00535 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.43□□□□□ -0.42
CDK5Q00535 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.43□□□□□ -0.42
CDK5Q00535 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CDK5Q00535 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CDK5Q00535 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CDK5Q00535 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC12.43□□□□□ -0.42
CDK5Q00535 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 AC011700.1-201ENST00000610409 2627 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CDK5Q00535 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.42□□□□□ -0.42
CDK5Q00535 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC12.42□□□□□ -0.42
CDK5Q00535 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.42□□□□□ -0.42
CDK5Q00535 AC138028.6-201ENST00000616106 1482 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.42□□□□□ -0.42
CDK5Q00535 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 ANKRD19P-201ENST00000338192 862 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 AC106827.1-201ENST00000366454 431 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 MTX1P1-201ENST00000440904 838 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 AC234783.1-201ENST00000441761 496 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 YBX1P6-201ENST00000442962 1002 ntBASIC12.42□□□□□ -0.42
CDK5Q00535 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CDK5Q00535 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CDK5Q00535 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.42□□□□□ -0.42
CDK5Q00535 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.42□□□□□ -0.42
CDK5Q00535 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms