Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 AC051619.9-201ENST00000623237 597 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 AL353726.2-201ENST00000623259 884 ntBASIC12.71□□□□□ -0.37
CLDN20P56880 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN20P56880 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN20P56880 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN20P56880 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDN20P56880 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CLDN20P56880 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CLDN20P56880 PEG13-201ENST00000631594 5667 ntBASIC12.71□□□□□ -0.38
CLDN20P56880 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDN20P56880 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.71□□□□□ -0.38
CLDN20P56880 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLDN20P56880 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDN20P56880 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CLDN20P56880 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN20P56880 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CLDN20P56880 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 AL928654.5-201ENST00000624831 2501 ntBASIC12.7□□□□□ -0.38
CLDN20P56880 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 AGAP12P-201ENST00000585227 2359 ntBASIC12.7□□□□□ -0.38
CLDN20P56880 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CLDN20P56880 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.7□□□□□ -0.38
CLDN20P56880 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.7□□□□□ -0.38
CLDN20P56880 MAGEA5-201ENST00000446757 942 ntBASIC12.7□□□□□ -0.38
CLDN20P56880 FGFR3P1-201ENST00000449999 601 ntBASIC12.7□□□□□ -0.38
CLDN20P56880 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 RPL18AP8-201ENST00000486071 528 ntBASIC12.7□□□□□ -0.38
CLDN20P56880 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.7□□□□□ -0.38
CLDN20P56880 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.7□□□□□ -0.38
CLDN20P56880 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN20P56880 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLDN20P56880 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLDN20P56880 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 AL139158.3-201ENST00000641212 1562 ntBASIC12.69□□□□□ -0.38
CLDN20P56880 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.69□□□□□ -0.38
CLDN20P56880 BX324167.2-201ENST00000623717 3316 ntBASIC12.69□□□□□ -0.38
CLDN20P56880 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN20P56880 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN20P56880 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms