Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SSR1P43307 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC14.81□□□□□ -0.04
SSR1P43307 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SSR1P43307 LINC00638-201ENST00000555578 2518 ntBASIC14.81□□□□□ -0.04
SSR1P43307 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.8□□□□□ -0.04
SSR1P43307 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SSR1P43307 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSR1P43307 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.8□□□□□ -0.04
SSR1P43307 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 AC104306.2-201ENST00000451877 341 ntBASIC14.8□□□□□ -0.04
SSR1P43307 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.8□□□□□ -0.04
SSR1P43307 SERPINA13P-202ENST00000478994 924 ntBASIC14.8□□□□□ -0.04
SSR1P43307 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.8□□□□□ -0.04
SSR1P43307 AC009779.1-201ENST00000551138 283 ntBASIC14.8□□□□□ -0.04
SSR1P43307 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.8□□□□□ -0.04
SSR1P43307 AC013355.1-201ENST00000562625 723 ntBASIC14.8□□□□□ -0.04
SSR1P43307 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.8□□□□□ -0.04
SSR1P43307 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.8□□□□□ -0.04
SSR1P43307 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.8□□□□□ -0.04
SSR1P43307 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.8□□□□□ -0.04
SSR1P43307 AC239800.4-201ENST00000603712 296 ntBASIC14.8□□□□□ -0.04
SSR1P43307 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 CIC-204ENST00000572681 8218 ntTSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SSR1P43307 RPL13AP3-202ENST00000494676 1473 ntBASIC14.8□□□□□ -0.04
SSR1P43307 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
SSR1P43307 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SSR1P43307 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 BRD7P5-201ENST00000299197 1822 ntBASIC14.8□□□□□ -0.04
SSR1P43307 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.8□□□□□ -0.04
SSR1P43307 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSR1P43307 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC14.8□□□□□ -0.04
SSR1P43307 AC004241.5-201ENST00000623870 2448 ntBASIC14.8□□□□□ -0.04
SSR1P43307 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.8□□□□□ -0.04
SSR1P43307 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 DPM3-202ENST00000368399 517 ntBASIC14.79□□□□□ -0.04
SSR1P43307 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 GK-202ENST00000378941 458 ntTSL 3 BASIC14.79□□□□□ -0.04
SSR1P43307 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SSR1P43307 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.79□□□□□ -0.04
SSR1P43307 ABCD1P2-201ENST00000429313 1601 ntBASIC14.79□□□□□ -0.04
SSR1P43307 SALL4P6-201ENST00000429385 1691 ntBASIC14.79□□□□□ -0.04
SSR1P43307 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 AC018735.1-201ENST00000437208 1502 ntBASIC14.79□□□□□ -0.04
SSR1P43307 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 RN7SL530P-201ENST00000485097 298 ntBASIC14.79□□□□□ -0.04
SSR1P43307 AC008620.2-201ENST00000510294 1569 ntBASIC14.79□□□□□ -0.04
SSR1P43307 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.79□□□□□ -0.04
SSR1P43307 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.79□□□□□ -0.04
SSR1P43307 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.79□□□□□ -0.04
SSR1P43307 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.79□□□□□ -0.04
SSR1P43307 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.79□□□□□ -0.04
SSR1P43307 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.79□□□□□ -0.04
SSR1P43307 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSR1P43307 AC114271.1-201ENST00000612689 2813 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms