Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.48□□□□□ -0.41
APOBEC1P41238 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.48□□□□□ -0.41
APOBEC1P41238 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOBEC1P41238 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBEC1P41238 STRCP1-201ENST00000509801 5328 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBEC1P41238 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBEC1P41238 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 KRT8P19-201ENST00000551916 1455 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOBEC1P41238 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBEC1P41238 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 PPT1-213ENST00000641319 2388 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOBEC1P41238 AP000356.3-201ENST00000382243 753 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOBEC1P41238 AL512430.1-201ENST00000392575 860 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBEC1P41238 EEF1DP6-201ENST00000449232 372 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.47□□□□□ -0.41
APOBEC1P41238 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOBEC1P41238 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBEC1P41238 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBEC1P41238 AC106872.11-201ENST00000605838 421 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 AL353726.2-201ENST00000623259 884 ntBASIC12.47□□□□□ -0.41
APOBEC1P41238 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
APOBEC1P41238 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.47□□□□□ -0.41
APOBEC1P41238 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.47□□□□□ -0.41
APOBEC1P41238 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
APOBEC1P41238 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
APOBEC1P41238 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 MKRN5P-201ENST00000445263 1467 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 MIR497HG-202ENST00000572453 3838 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AL513497.1-201ENST00000624273 2083 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
APOBEC1P41238 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 AC005077.3-201ENST00000449614 213 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AC093300.1-201ENST00000510368 1201 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms