Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 SNU13-204ENST00000402458 462 ntTSL 3 BASIC11.86□□□□□ -0.51
CD40P25942 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC11.86□□□□□ -0.51
CD40P25942 KRT18P4-201ENST00000422599 1288 ntBASIC11.86□□□□□ -0.51
CD40P25942 AP000244.1-201ENST00000424582 201 ntBASIC11.86□□□□□ -0.51
CD40P25942 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 ASS1P2-201ENST00000439895 1223 ntBASIC11.86□□□□□ -0.51
CD40P25942 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC11.86□□□□□ -0.51
CD40P25942 AC024293.1-201ENST00000467930 498 ntBASIC11.86□□□□□ -0.51
CD40P25942 REEP5-205ENST00000504247 480 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 AC026410.1-201ENST00000507366 1101 ntBASIC11.86□□□□□ -0.51
CD40P25942 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC11.86□□□□□ -0.51
CD40P25942 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
CD40P25942 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 GOLGA2P7-209ENST00000560408 745 ntBASIC11.86□□□□□ -0.51
CD40P25942 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 AP005264.6-204ENST00000588436 719 ntBASIC11.86□□□□□ -0.51
CD40P25942 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 FAM90A21P-201ENST00000510875 1396 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A15P-201ENST00000514465 1395 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A6P-201ENST00000515148 1394 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A16P-201ENST00000526662 1395 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A9P-201ENST00000527940 1395 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A5P-201ENST00000528738 1395 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A14P-201ENST00000530386 1395 ntBASIC11.86□□□□□ -0.51
CD40P25942 FAM90A13P-201ENST00000534703 1395 ntBASIC11.86□□□□□ -0.51
CD40P25942 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC11.86□□□□□ -0.51
CD40P25942 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.86□□□□□ -0.51
CD40P25942 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC11.86□□□□□ -0.51
CD40P25942 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD40P25942 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CD40P25942 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 AL672207.1-201ENST00000328462 1570 ntBASIC11.85□□□□□ -0.51
CD40P25942 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CD40P25942 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CD40P25942 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD40P25942 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms