Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC004899.2-201ENST00000622993 3860 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC006372.4-201ENST00000624122 1543 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC007279.1-201ENST00000448547 837 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 FTH1P22-201ENST00000456305 520 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 MIR4265-201ENST00000582152 99 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AC009560.1-201ENST00000620208 434 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 CU633904.3-201ENST00000624042 1029 ntBASIC12.39□□□□□ -0.43
HLA-DOBP13765 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.39□□□□□ -0.43
HLA-DOBP13765 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HLA-DOBP13765 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 TEKT4P2-202ENST00000559466 1312 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 AC092053.3-201ENST00000641308 4975 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 AC136604.1-202ENST00000425471 771 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 EEF1DP2-201ENST00000433698 843 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 AL133466.1-201ENST00000447582 150 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 MIR3940-201ENST00000579148 102 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.38□□□□□ -0.43
HLA-DOBP13765 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HLA-DOBP13765 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.38□□□□□ -0.43
HLA-DOBP13765 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms