Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CTBP2P8-201ENST00000422584 1330 ntBASIC13.64□□□□□ -0.23
SATB2Q9UPW6 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AC016397.2-201ENST00000624848 1985 ntBASIC13.64□□□□□ -0.23
SATB2Q9UPW6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 AC090386.2-201ENST00000623010 1039 ntBASIC13.64□□□□□ -0.23
SATB2Q9UPW6 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SATB2Q9UPW6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 KRT17P4-201ENST00000429445 819 ntBASIC13.63□□□□□ -0.23
SATB2Q9UPW6 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 SCARNA12-201ENST00000459155 270 ntBASIC13.63□□□□□ -0.23
SATB2Q9UPW6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 AC226150.1-201ENST00000544259 466 ntBASIC13.63□□□□□ -0.23
SATB2Q9UPW6 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.63□□□□□ -0.23
SATB2Q9UPW6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SATB2Q9UPW6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SATB2Q9UPW6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SATB2Q9UPW6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms