Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AC005722.1-201ENST00000431878 964 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 MTX1P1-201ENST00000440904 838 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 RNMTL1P1-201ENST00000454103 560 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 RPSAP36-202ENST00000494591 1261 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 COQ10BP2-201ENST00000513804 724 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AC004923.1-202ENST00000642106 209 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AC067931.2-201ENST00000623655 2003 ntBASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 ERG-211ENST00000453032 1595 ntTSL 2 BASIC14.05□□□□□ -0.16
PHACTR1Q9C0D0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 MIR1909-201ENST00000411312 80 ntBASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 OR8T1P-201ENST00000421347 918 ntBASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 PPP1R2P4-201ENST00000424051 595 ntBASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PHACTR1Q9C0D0 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHACTR1Q9C0D0 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms