Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.88□□□□□ -0.35
HPS1Q92902 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.88□□□□□ -0.35
HPS1Q92902 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.88□□□□□ -0.35
HPS1Q92902 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HPS1Q92902 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 ACTBP8-201ENST00000403258 1108 ntBASIC12.87□□□□□ -0.35
HPS1Q92902 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.87□□□□□ -0.35
HPS1Q92902 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 GNRHR2-203ENST00000581100 1187 ntBASIC12.87□□□□□ -0.35
HPS1Q92902 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.87□□□□□ -0.35
HPS1Q92902 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 MIR6787-201ENST00000616675 61 ntBASIC12.87□□□□□ -0.35
HPS1Q92902 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.87□□□□□ -0.35
HPS1Q92902 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC12.87□□□□□ -0.35
HPS1Q92902 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HPS1Q92902 AL360270.3-201ENST00000609118 1348 ntBASIC12.87□□□□□ -0.35
HPS1Q92902 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.87□□□□□ -0.35
HPS1Q92902 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
HPS1Q92902 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 AL355102.3-201ENST00000554299 1678 ntBASIC12.86□□□□□ -0.35
HPS1Q92902 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.86□□□□□ -0.35
HPS1Q92902 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HPS1Q92902 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms