Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC244093.1-201ENST00000610837 814 ntBASIC12.37□□□□□ -0.43
LRRC28Q86X40 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 RCC2P1-201ENST00000452257 1476 ntBASIC12.37□□□□□ -0.43
LRRC28Q86X40 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AC018735.1-201ENST00000437208 1502 ntBASIC12.37□□□□□ -0.43
LRRC28Q86X40 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 E2F3P2-201ENST00000447755 1422 ntBASIC12.37□□□□□ -0.43
LRRC28Q86X40 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 KRT18P15-201ENST00000458108 1291 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 SERPINA13P-202ENST00000478994 924 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC005730.2-201ENST00000564549 1184 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 MIR3615-201ENST00000581999 87 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC005324.6-201ENST00000587972 613 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC132192.2-201ENST00000596206 1147 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AC244452.3-201ENST00000636814 210 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AOC4P-203ENST00000566825 2289 ntBASIC12.36□□□□□ -0.43
LRRC28Q86X40 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.36□□□□□ -0.43
LRRC28Q86X40 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LRRC28Q86X40 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.35□□□□□ -0.43
LRRC28Q86X40 AL805961.2-201ENST00000642139 4817 ntBASIC12.35□□□□□ -0.43
LRRC28Q86X40 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
LRRC28Q86X40 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms