Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
GFRA1P56159 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.31□□□□□ -0.44
GFRA1P56159 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 AC108024.1-201ENST00000626286 1721 ntBASIC12.31□□□□□ -0.44
GFRA1P56159 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
GFRA1P56159 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.3□□□□□ -0.44
GFRA1P56159 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
GFRA1P56159 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.3□□□□□ -0.44
GFRA1P56159 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.3□□□□□ -0.44
GFRA1P56159 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.3□□□□□ -0.44
GFRA1P56159 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.3□□□□□ -0.44
GFRA1P56159 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
GFRA1P56159 AC008972.2-201ENST00000606587 494 ntBASIC12.3□□□□□ -0.44
GFRA1P56159 CSTP2-201ENST00000610599 398 ntBASIC12.3□□□□□ -0.44
GFRA1P56159 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
GFRA1P56159 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
GFRA1P56159 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.3□□□□□ -0.44
GFRA1P56159 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.3□□□□□ -0.44
GFRA1P56159 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
GFRA1P56159 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
GFRA1P56159 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
GFRA1P56159 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.29□□□□□ -0.44
GFRA1P56159 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.29□□□□□ -0.44
GFRA1P56159 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
GFRA1P56159 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
GFRA1P56159 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 AC097065.1-201ENST00000425737 517 ntBASIC12.29□□□□□ -0.44
GFRA1P56159 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.29□□□□□ -0.44
GFRA1P56159 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.29□□□□□ -0.44
GFRA1P56159 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 AC090136.2-201ENST00000517809 420 ntBASIC12.29□□□□□ -0.44
GFRA1P56159 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.29□□□□□ -0.44
GFRA1P56159 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 AL359219.1-201ENST00000556311 934 ntBASIC12.29□□□□□ -0.44
GFRA1P56159 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.29□□□□□ -0.44
GFRA1P56159 MIR6746-201ENST00000620971 63 ntBASIC12.29□□□□□ -0.44
GFRA1P56159 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
GFRA1P56159 AL672207.1-201ENST00000328462 1570 ntBASIC12.29□□□□□ -0.44
GFRA1P56159 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
GFRA1P56159 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
GFRA1P56159 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.29□□□□□ -0.44
GFRA1P56159 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms