Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.29■□□□□ 0.2
TNNI2P48788 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNNI2P48788 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.29■□□□□ 0.2
TNNI2P48788 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 AC040160.2-201ENST00000623816 1675 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 AL136379.1-201ENST00000623471 2642 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 KRT8P30-201ENST00000432100 650 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 SERBP1P2-201ENST00000436888 1164 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.28■□□□□ 0.2
TNNI2P48788 BCL2L12P1-201ENST00000508390 733 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC16.28■□□□□ 0.2
TNNI2P48788 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.28■□□□□ 0.2
TNNI2P48788 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.28■□□□□ 0.2
TNNI2P48788 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 KRT8P34-201ENST00000577607 1044 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.28■□□□□ 0.2
TNNI2P48788 RN7SL524P-201ENST00000581152 300 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 KRT8P25-201ENST00000473150 1456 ntBASIC16.28■□□□□ 0.2
TNNI2P48788 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNNI2P48788 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.28■□□□□ 0.2
TNNI2P48788 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNNI2P48788 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.28■□□□□ 0.2
TNNI2P48788 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TNNI2P48788 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TNNI2P48788 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.27■□□□□ 0.2
TNNI2P48788 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.27■□□□□ 0.2
TNNI2P48788 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TNNI2P48788 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TNNI2P48788 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
TNNI2P48788 EEF1DP5-201ENST00000431410 772 ntBASIC16.27■□□□□ 0.2
TNNI2P48788 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.27■□□□□ 0.2
TNNI2P48788 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC16.27■□□□□ 0.2
TNNI2P48788 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNNI2P48788 RPSAP70-201ENST00000504462 864 ntBASIC16.27■□□□□ 0.2
TNNI2P48788 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.27■□□□□ 0.2
TNNI2P48788 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.27■□□□□ 0.2
TNNI2P48788 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.27■□□□□ 0.2
TNNI2P48788 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.27■□□□□ 0.2
TNNI2P48788 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.27■□□□□ 0.2
TNNI2P48788 AC011462.4-201ENST00000616866 449 ntBASIC16.27■□□□□ 0.2
TNNI2P48788 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms