Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 VDAC1P11-201ENST00000458323 852 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 RPL29P2-201ENST00000488409 460 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 AC112250.1-201ENST00000504640 745 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 KRT8P34-201ENST00000577607 1044 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 MIR4326-201ENST00000582203 59 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 AL357143.1-203ENST00000639750 881 ntBASIC14.41□□□□□ -0.1
MTHFRP42898 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
MTHFRP42898 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
MTHFRP42898 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.41□□□□□ -0.1
MTHFRP42898 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MTHFRP42898 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 AL137784.3-201ENST00000623858 2288 ntBASIC14.4□□□□□ -0.1
MTHFRP42898 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.4□□□□□ -0.1
MTHFRP42898 RN7SL832P-201ENST00000607781 1756 ntBASIC14.4□□□□□ -0.1
MTHFRP42898 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MTHFRP42898 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
MTHFRP42898 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.4□□□□□ -0.1
MTHFRP42898 TPT1P11-201ENST00000458482 498 ntBASIC14.4□□□□□ -0.1
MTHFRP42898 HNRNPA3P6-201ENST00000472163 1006 ntBASIC14.4□□□□□ -0.1
MTHFRP42898 AC113347.2-201ENST00000512350 279 ntBASIC14.4□□□□□ -0.1
MTHFRP42898 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
MTHFRP42898 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.4□□□□□ -0.1
MTHFRP42898 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 AL022313.4-201ENST00000562756 2046 ntBASIC14.4□□□□□ -0.1
MTHFRP42898 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
MTHFRP42898 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.4□□□□□ -0.1
MTHFRP42898 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
MTHFRP42898 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
MTHFRP42898 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
MTHFRP42898 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MTHFRP42898 RNA5SP491-201ENST00000362936 118 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.39□□□□□ -0.11
MTHFRP42898 RPL18AP16-201ENST00000424057 531 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 AC010086.2-201ENST00000428616 226 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 AC005722.1-201ENST00000431878 964 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.39□□□□□ -0.11
MTHFRP42898 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 AC004923.3-201ENST00000527532 355 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.39□□□□□ -0.11
MTHFRP42898 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.39□□□□□ -0.11
MTHFRP42898 ANKRD26P1-203ENST00000569528 966 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.39□□□□□ -0.11
MTHFRP42898 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.39□□□□□ -0.11
MTHFRP42898 AC016582.2-202ENST00000587765 1094 ntBASIC14.39□□□□□ -0.11
MTHFRP42898 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.39□□□□□ -0.11
MTHFRP42898 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms