Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CCDC187A0A096LP49 HSPA7-201ENST00000445535 1927 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 BX640514.1-201ENST00000583223 1918 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AC012617.1-204ENST00000586340 2305 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PHBP10-201ENST00000416467 784 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 ANKRD26P1-203ENST00000569528 966 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RN7SL602P-201ENST00000578326 324 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 MIR3940-201ENST00000579148 102 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RN7SL718P-201ENST00000581254 303 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 BAP1-211ENST00000615113 489 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AF013593.1-201ENST00000458074 1487 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AC087386.2-201ENST00000623212 4637 ntBASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
CCDC187A0A096LP49 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC187A0A096LP49 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13□□□□□ -0.33
CCDC187A0A096LP49 PGK1P2-201ENST00000431702 1214 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 CCND3P1-201ENST00000438347 580 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 BRI3P1-201ENST00000440440 378 ntBASIC13□□□□□ -0.33
CCDC187A0A096LP49 AL773545.2-201ENST00000442149 472 ntBASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms