Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC133539.2-201ENST00000604757 467 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 AL591471.1-201ENST00000621855 229 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.21□□□□□ -0.45
AP3S1Q92572 AC093462.1-201ENST00000621167 1683 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 LINC02228-202ENST00000641261 2489 ntBASIC12.21□□□□□ -0.45
AP3S1Q92572 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
AP3S1Q92572 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC12.21□□□□□ -0.46
AP3S1Q92572 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 AC092139.4-201ENST00000624318 2794 ntBASIC12.21□□□□□ -0.46
AP3S1Q92572 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.21□□□□□ -0.46
AP3S1Q92572 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.21□□□□□ -0.46
AP3S1Q92572 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
AP3S1Q92572 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
AP3S1Q92572 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
AP3S1Q92572 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 FN1-206ENST00000359671 8524 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.2□□□□□ -0.46
AP3S1Q92572 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S1Q92572 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 AC106820.3-201ENST00000561653 397 ntBASIC12.2□□□□□ -0.46
AP3S1Q92572 AC104794.3-201ENST00000566840 1248 ntBASIC12.2□□□□□ -0.46
AP3S1Q92572 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.2□□□□□ -0.46
AP3S1Q92572 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.2□□□□□ -0.46
AP3S1Q92572 Z92544.3-201ENST00000624747 417 ntBASIC12.2□□□□□ -0.46
AP3S1Q92572 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
AP3S1Q92572 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.2□□□□□ -0.46
AP3S1Q92572 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
AP3S1Q92572 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.19□□□□□ -0.46
AP3S1Q92572 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
AP3S1Q92572 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms