Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.39□□□□□ -0.43
LRRC28Q86X40 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.39□□□□□ -0.43
LRRC28Q86X40 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.39□□□□□ -0.43
LRRC28Q86X40 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.39□□□□□ -0.43
LRRC28Q86X40 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LRRC28Q86X40 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 AC020917.4-201ENST00000623994 1999 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 AL645937.6-201ENST00000641122 3727 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 MIR1247-201ENST00000408206 136 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 SNORA50C-201ENST00000408535 133 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 AC100827.2-201ENST00000563214 1194 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 AL162426.1-201ENST00000624141 743 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 SNORA50.1-201ENST00000628590 135 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 PCDHB17P-202ENST00000623466 3066 ntBASIC12.38□□□□□ -0.43
LRRC28Q86X40 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.38□□□□□ -0.43
LRRC28Q86X40 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
LRRC28Q86X40 AC011481.3-201ENST00000623895 5594 ntBASIC12.37□□□□□ -0.43
LRRC28Q86X40 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LRRC28Q86X40 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.37□□□□□ -0.43
LRRC28Q86X40 AC103810.3-201ENST00000583567 96 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms