Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 MIA-201ENST00000263369 632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 AFMID-205ENST00000586731 550 ntTSL 3 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 MIA-203ENST00000594436 507 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CACNA1BQ00975 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CACNA1BQ00975 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 SUCLG2P2-201ENST00000307241 1296 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 AL512288.2-201ENST00000426041 367 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 AL139220.1-201ENST00000436802 520 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 PHKA1P1-201ENST00000420457 621 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 AC011890.1-201ENST00000427955 303 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 MESTP2-201ENST00000559787 889 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 AC090772.2-201ENST00000578443 564 ntTSL 4 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 MYO5BP1-201ENST00000610994 1239 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.59□□□□□ -0.39
CACNA1BQ00975 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CACNA1BQ00975 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
CACNA1BQ00975 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CACNA1BQ00975 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CACNA1BQ00975 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
CACNA1BQ00975 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CACNA1BQ00975 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CACNA1BQ00975 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CACNA1BQ00975 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.58□□□□□ -0.4
CACNA1BQ00975 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CACNA1BQ00975 AC232323.1-201ENST00000540724 2099 ntBASIC12.58□□□□□ -0.4
CACNA1BQ00975 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CACNA1BQ00975 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.58□□□□□ -0.4
CACNA1BQ00975 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CACNA1BQ00975 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CACNA1BQ00975 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms