Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 SNORD23-201ENST00000408876 110 ntBASIC15.11■□□□□ 0.01
CPT1AP50416 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 AL359092.2-201ENST00000423330 585 ntBASIC15.11■□□□□ 0.01
CPT1AP50416 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 AC133555.4-201ENST00000569081 152 ntBASIC15.11■□□□□ 0.01
CPT1AP50416 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CPT1AP50416 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC15.11■□□□□ 0.01
CPT1AP50416 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
CPT1AP50416 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.11■□□□□ 0.01
CPT1AP50416 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CPT1AP50416 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CPT1AP50416 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.11■□□□□ 0.01
CPT1AP50416 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CPT1AP50416 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 AC004522.1-201ENST00000419978 654 ntBASIC15.1■□□□□ 0.01
CPT1AP50416 AC023141.7-201ENST00000430646 407 ntBASIC15.1■□□□□ 0.01
CPT1AP50416 RBM14-205ENST00000443702 732 ntTSL 3 BASIC15.1■□□□□ 0.01
CPT1AP50416 GYG1-209ENST00000483267 801 ntTSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 AC099328.1-201ENST00000498809 1030 ntBASIC15.1■□□□□ 0.01
CPT1AP50416 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.1■□□□□ 0.01
CPT1AP50416 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.1■□□□□ 0.01
CPT1AP50416 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.1■□□□□ 0.01
CPT1AP50416 AC245369.7-201ENST00000631386 350 ntBASIC15.1■□□□□ 0.01
CPT1AP50416 AL357143.1-203ENST00000639750 881 ntBASIC15.1■□□□□ 0.01
CPT1AP50416 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 MST1P2-201ENST00000457982 2291 ntBASIC15.1■□□□□ 0.01
CPT1AP50416 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CPT1AP50416 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.1■□□□□ 0.01
CPT1AP50416 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CPT1AP50416 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 AC011477.7-201ENST00000617163 1440 ntBASIC15.09■□□□□ 0.01
CPT1AP50416 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CPT1AP50416 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 HSD3BP1-201ENST00000286193 1111 ntBASIC15.09■□□□□ 0.01
CPT1AP50416 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 KRT18P44-201ENST00000416086 1285 ntBASIC15.09■□□□□ 0.01
CPT1AP50416 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC008494.1-201ENST00000497612 796 ntBASIC15.09■□□□□ 0.01
CPT1AP50416 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.09■□□□□ 0.01
CPT1AP50416 AC113347.2-201ENST00000512350 279 ntBASIC15.09■□□□□ 0.01
CPT1AP50416 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.09■□□□□ 0.01
CPT1AP50416 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CPT1AP50416 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.09■□□□□ 0.01
CPT1AP50416 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms