Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SLC6A9P48067 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 RN7SL530P-201ENST00000485097 298 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 AC091804.1-201ENST00000486888 567 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 AC135782.3-201ENST00000562782 2105 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SLC6A9P48067 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 LINC01815-202ENST00000641468 1409 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 MARK2P9-201ENST00000430958 1727 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 RPL13AP3-202ENST00000494676 1473 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
SLC6A9P48067 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.32□□□□□ -0.44
SLC6A9P48067 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.32□□□□□ -0.44
SLC6A9P48067 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 AKR7A2P1-201ENST00000460134 915 ntBASIC12.32□□□□□ -0.44
SLC6A9P48067 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SLC6A9P48067 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.32□□□□□ -0.44
SLC6A9P48067 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.32□□□□□ -0.44
SLC6A9P48067 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.32□□□□□ -0.44
SLC6A9P48067 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.32□□□□□ -0.44
SLC6A9P48067 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.32□□□□□ -0.44
SLC6A9P48067 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.32□□□□□ -0.44
SLC6A9P48067 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SLC6A9P48067 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SLC6A9P48067 PCDHA6-201ENST00000378126 3267 ntBASIC12.32□□□□□ -0.44
SLC6A9P48067 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms