Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC1A1P43005 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC1A1P43005 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SLC1A1P43005 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 TUBBP5-203ENST00000508529 1334 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC1A1P43005 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 AC012531.1-201ENST00000562848 2680 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 MIR1307-201ENST00000408840 149 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC1A1P43005 MIR1908-201ENST00000410394 80 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC1A1P43005 RPSAP15-201ENST00000448168 861 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC1A1P43005 RN7SL788P-201ENST00000460504 316 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC1A1P43005 AC091804.1-201ENST00000486888 567 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 AL118558.3-201ENST00000607414 1079 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.46□□□□□ -0.09
SLC1A1P43005 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC1A1P43005 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.46□□□□□ -0.09
SLC1A1P43005 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SLC1A1P43005 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC1A1P43005 PCDHB19P-202ENST00000625133 2914 ntBASIC14.46□□□□□ -0.09
SLC1A1P43005 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC1A1P43005 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SLC1A1P43005 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.46□□□□□ -0.1
SLC1A1P43005 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SLC1A1P43005 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
SLC1A1P43005 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC1A1P43005 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.46□□□□□ -0.1
SLC1A1P43005 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.46□□□□□ -0.1
SLC1A1P43005 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SLC1A1P43005 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.45□□□□□ -0.1
SLC1A1P43005 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SLC1A1P43005 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 ELK2AP-201ENST00000392510 1007 ntBASIC14.45□□□□□ -0.1
SLC1A1P43005 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 SSR4P1-201ENST00000415143 412 ntBASIC14.45□□□□□ -0.1
SLC1A1P43005 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 RPS2P32-201ENST00000439199 892 ntBASIC14.45□□□□□ -0.1
SLC1A1P43005 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.45□□□□□ -0.1
SLC1A1P43005 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 KRT8P31-201ENST00000504812 1408 ntBASIC14.45□□□□□ -0.1
SLC1A1P43005 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC1A1P43005 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.45□□□□□ -0.1
SLC1A1P43005 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SLC1A1P43005 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC1A1P43005 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms