Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
RFC3P40938 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 AL031595.1-201ENST00000623969 4709 ntBASIC12.74□□□□□ -0.37
RFC3P40938 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RFC3P40938 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 SHMT1P1-201ENST00000419974 1312 ntBASIC12.73□□□□□ -0.37
RFC3P40938 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 RNVU1-8-201ENST00000364272 125 ntBASIC12.73□□□□□ -0.37
RFC3P40938 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 AL627389.1-201ENST00000413508 1182 ntBASIC12.73□□□□□ -0.37
RFC3P40938 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 AC108734.2-201ENST00000420887 1069 ntBASIC12.73□□□□□ -0.37
RFC3P40938 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 AC226150.1-201ENST00000544259 466 ntBASIC12.73□□□□□ -0.37
RFC3P40938 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.73□□□□□ -0.37
RFC3P40938 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.73□□□□□ -0.37
RFC3P40938 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 AC091769.1-201ENST00000619576 568 ntBASIC12.73□□□□□ -0.37
RFC3P40938 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.73□□□□□ -0.37
RFC3P40938 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.73□□□□□ -0.37
RFC3P40938 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.73□□□□□ -0.37
RFC3P40938 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFC3P40938 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.72□□□□□ -0.37
RFC3P40938 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
RFC3P40938 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFC3P40938 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.72□□□□□ -0.37
RFC3P40938 LINC00265-2P-201ENST00000413372 782 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms