Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 FRMPD2B-201ENST00000431305 1347 ntBASIC14.63□□□□□ -0.07
CHRNA3P32297 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHRNA3P32297 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CHRNA3P32297 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.63□□□□□ -0.07
CHRNA3P32297 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 PCDHB19P-202ENST00000625133 2914 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 PI4KAP2-201ENST00000360806 2080 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CHRNA3P32297 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRNA3P32297 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNA3P32297 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNA3P32297 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.62□□□□□ -0.07
CHRNA3P32297 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AC134698.3-201ENST00000523880 214 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 RTN3P1-201ENST00000536295 711 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.62□□□□□ -0.07
CHRNA3P32297 AC084346.2-201ENST00000607097 949 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 AC079336.7-201ENST00000623428 1078 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 KRT8P19-201ENST00000551916 1455 ntBASIC14.62□□□□□ -0.07
CHRNA3P32297 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CHRNA3P32297 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CHRNA3P32297 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHRNA3P32297 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNA3P32297 MANEA-AS1-201ENST00000564541 2268 ntBASIC14.61□□□□□ -0.07
CHRNA3P32297 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CHRNA3P32297 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNA3P32297 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNA3P32297 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNA3P32297 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.61□□□□□ -0.07
CHRNA3P32297 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.61□□□□□ -0.07
CHRNA3P32297 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNA3P32297 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.61□□□□□ -0.07
CHRNA3P32297 AC116345.2-201ENST00000512837 523 ntBASIC14.61□□□□□ -0.07
CHRNA3P32297 RNA5SP423-201ENST00000517127 109 ntBASIC14.61□□□□□ -0.07
CHRNA3P32297 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.61□□□□□ -0.07
CHRNA3P32297 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNA3P32297 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.61□□□□□ -0.07
CHRNA3P32297 AL118506.1-201ENST00000601296 3082 ntBASIC14.61□□□□□ -0.07
CHRNA3P32297 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
CHRNA3P32297 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CHRNA3P32297 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHRNA3P32297 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms