Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC040160.2-201ENST00000623816 1675 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 RCC2P5-201ENST00000492126 1487 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AL807761.2-201ENST00000422849 729 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC098934.1-203ENST00000442868 1262 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AP000358.1-201ENST00000456260 156 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 RN7SL788P-201ENST00000460504 316 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 RPL18AP8-201ENST00000486071 528 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SIGLEC18P-201ENST00000602271 909 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC012044.1-201ENST00000603431 297 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 AL031673.1-201ENST00000611460 466 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 AL353770.1-201ENST00000614915 403 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 TBC1D3J-201ENST00000620719 1426 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 MSNP1-201ENST00000511640 1732 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AL358781.1-202ENST00000321081 1360 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 EGLN3-205ENST00000547327 2849 ntBASIC12.42□□□□□ -0.42
HLA-DOBP13765 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-DOBP13765 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.42□□□□□ -0.42
HLA-DOBP13765 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 COL6A4P2-202ENST00000504443 2753 ntBASIC12.41□□□□□ -0.42
HLA-DOBP13765 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 AF013593.1-201ENST00000458074 1487 ntBASIC12.41□□□□□ -0.42
HLA-DOBP13765 FP325330.2-201ENST00000624219 5630 ntBASIC12.41□□□□□ -0.42
HLA-DOBP13765 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HLA-DOBP13765 LINC00265-2P-201ENST00000413372 782 ntBASIC12.41□□□□□ -0.42
HLA-DOBP13765 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.41□□□□□ -0.42
HLA-DOBP13765 PES1P2-201ENST00000449745 1735 ntBASIC12.41□□□□□ -0.42
HLA-DOBP13765 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms