Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.54□□□□□ -0.4
FREM3P0C091 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.54□□□□□ -0.4
FREM3P0C091 AP005264.5-201ENST00000590066 467 ntBASIC12.54□□□□□ -0.4
FREM3P0C091 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.54□□□□□ -0.4
FREM3P0C091 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
FREM3P0C091 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
FREM3P0C091 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 SALL4P6-201ENST00000429385 1691 ntBASIC12.54□□□□□ -0.4
FREM3P0C091 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.54□□□□□ -0.4
FREM3P0C091 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
FREM3P0C091 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 AC097065.1-201ENST00000425737 517 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
FREM3P0C091 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
FREM3P0C091 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 AC026120.2-201ENST00000617239 309 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 AL365181.1-201ENST00000564032 1828 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 TBC1D27-202ENST00000424239 1573 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 AC061965.1-201ENST00000560524 1465 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 SNORA50C-201ENST00000408535 133 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC12.53□□□□□ -0.4
FREM3P0C091 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
FREM3P0C091 PRSS3P1-201ENST00000503996 742 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 SNORA50.1-201ENST00000628590 135 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 COL6A4P2-202ENST00000504443 2753 ntBASIC12.53□□□□□ -0.4
FREM3P0C091 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
FREM3P0C091 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.53□□□□□ -0.4
FREM3P0C091 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
FREM3P0C091 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
FREM3P0C091 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
FREM3P0C091 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
FREM3P0C091 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.52□□□□□ -0.4
FREM3P0C091 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
FREM3P0C091 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
FREM3P0C091 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.52□□□□□ -0.4
FREM3P0C091 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.52□□□□□ -0.4
FREM3P0C091 RNA5SP406-201ENST00000516106 112 ntBASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms