Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 IGHV3-71-201ENST00000523324 359 ntBASIC12.34□□□□□ -0.43
APOC1P02654 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 HILS1-202ENST00000545329 423 ntBASIC12.34□□□□□ -0.43
APOC1P02654 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.34□□□□□ -0.43
APOC1P02654 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 AL096828.3-201ENST00000615354 462 ntBASIC12.34□□□□□ -0.43
APOC1P02654 AC009542.2-202ENST00000619004 1067 ntBASIC12.34□□□□□ -0.43
APOC1P02654 AC068587.8-201ENST00000641239 219 ntBASIC12.34□□□□□ -0.43
APOC1P02654 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
APOC1P02654 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.34□□□□□ -0.43
APOC1P02654 SALL4P6-201ENST00000429385 1691 ntBASIC12.34□□□□□ -0.43
APOC1P02654 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 VENTXP1-201ENST00000569334 2716 ntBASIC12.34□□□□□ -0.43
APOC1P02654 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
APOC1P02654 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.34□□□□□ -0.43
APOC1P02654 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.34□□□□□ -0.43
APOC1P02654 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOC1P02654 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
APOC1P02654 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOC1P02654 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOC1P02654 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOC1P02654 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
APOC1P02654 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOC1P02654 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC1P02654 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOC1P02654 SNORA50C-201ENST00000408535 133 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AC006987.1-201ENST00000413610 527 ntBASIC12.33□□□□□ -0.44
APOC1P02654 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 FAM86HP-204ENST00000513466 959 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC1P02654 AC009779.1-201ENST00000551138 283 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC1P02654 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC1P02654 SNORD3B-2-202ENST00000571722 791 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AC104982.3-201ENST00000581995 514 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 AC022748.3-201ENST00000621828 275 ntBASIC12.33□□□□□ -0.44
APOC1P02654 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.33□□□□□ -0.44
APOC1P02654 AC015967.2-201ENST00000624092 234 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AC006435.4-201ENST00000625037 234 ntBASIC12.33□□□□□ -0.44
APOC1P02654 SNORA50.1-201ENST00000628590 135 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AL356737.1-201ENST00000634391 234 ntBASIC12.33□□□□□ -0.44
APOC1P02654 AL139424.3-202ENST00000641619 917 ntBASIC12.33□□□□□ -0.44
APOC1P02654 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 AC020658.7-201ENST00000624274 2442 ntBASIC12.33□□□□□ -0.44
APOC1P02654 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
APOC1P02654 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC1P02654 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC1P02654 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms