Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CNOT4O95628 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 AC006372.4-201ENST00000624122 1543 ntBASIC12.4□□□□□ -0.42
CNOT4O95628 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CNOT4O95628 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.4□□□□□ -0.42
CNOT4O95628 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CNOT4O95628 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
CNOT4O95628 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CNOT4O95628 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CNOT4O95628 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CNOT4O95628 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CNOT4O95628 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.39□□□□□ -0.43
CNOT4O95628 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
CNOT4O95628 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 GUSBP10-201ENST00000417412 665 ntBASIC12.39□□□□□ -0.43
CNOT4O95628 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.39□□□□□ -0.43
CNOT4O95628 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.39□□□□□ -0.43
CNOT4O95628 RN7SL788P-201ENST00000460504 316 ntBASIC12.39□□□□□ -0.43
CNOT4O95628 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.39□□□□□ -0.43
CNOT4O95628 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.39□□□□□ -0.43
CNOT4O95628 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.39□□□□□ -0.43
CNOT4O95628 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.39□□□□□ -0.43
CNOT4O95628 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.39□□□□□ -0.43
CNOT4O95628 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 YRDCP1-201ENST00000621419 643 ntBASIC12.39□□□□□ -0.43
CNOT4O95628 CR392039.2-201ENST00000623182 509 ntBASIC12.39□□□□□ -0.43
CNOT4O95628 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 CICP8-201ENST00000455800 2813 ntBASIC12.39□□□□□ -0.43
CNOT4O95628 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.39□□□□□ -0.43
CNOT4O95628 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.39□□□□□ -0.43
CNOT4O95628 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CNOT4O95628 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CNOT4O95628 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.38□□□□□ -0.43
CNOT4O95628 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CNOT4O95628 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms