Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 AC011700.1-201ENST00000610409 2627 ntBASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RCL1Q9Y2P8 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC093462.1-201ENST00000621167 1683 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 LINC00115-201ENST00000473798 1317 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC134312.5-201ENST00000568031 1313 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 LINC00563-201ENST00000566370 1400 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC022217.1-201ENST00000521069 738 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 RBM8B-201ENST00000555532 525 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC124068.2-201ENST00000569473 1109 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 AL161773.1-201ENST00000624845 863 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CICP9-201ENST00000444451 1913 ntBASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RCL1Q9Y2P8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 MIR326-201ENST00000362220 95 ntBASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AL136309.1-201ENST00000403917 691 ntBASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 BAATP1-201ENST00000412284 1225 ntBASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.35□□□□□ -0.59
RCL1Q9Y2P8 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms