Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 VENTXP1-201ENST00000569334 2716 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 MARK2P5-201ENST00000507649 634 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 FAM86HP-204ENST00000513466 959 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 KRT8P1-201ENST00000557533 1207 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 AC013355.1-201ENST00000562625 723 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 RN7SL455P-201ENST00000580629 282 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 AC009542.2-202ENST00000619004 1067 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 OR2I1P-208ENST00000641137 4948 ntBASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
THUMPD1Q9NXG2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AC007279.1-201ENST00000448547 837 ntBASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AC104982.3-201ENST00000581995 514 ntBASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AC079336.7-201ENST00000623428 1078 ntBASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 AL022323.5-201ENST00000624101 2059 ntBASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
THUMPD1Q9NXG2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms