Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 DNM1P30-201ENST00000563586 452 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 RN7SL665P-201ENST00000578793 300 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 MIR4522-201ENST00000584932 87 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AP001542.1-201ENST00000591314 200 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC087045.2-201ENST00000606279 1003 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC103810.10-201ENST00000606504 343 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AL133445.2-201ENST00000611191 527 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC051619.9-201ENST00000623237 597 ntBASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CUEDC1Q9NWM3 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 MARK2P9-201ENST00000430958 1727 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC025271.4-201ENST00000621477 1726 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AL627231.1-201ENST00000394467 1125 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC078991.1-201ENST00000437297 610 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AL157792.1-201ENST00000488281 530 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CTBP2P4-201ENST00000513884 920 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC092171.5-201ENST00000608012 942 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AGAP12P-201ENST00000585227 2359 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 AC006372.4-201ENST00000624122 1543 ntBASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CUEDC1Q9NWM3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms