Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 ORAOV1P1-201ENST00000503108 395 ntBASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.96□□□□□ -0.17
LYSMD3Q7Z3D4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.96□□□□□ -0.18
LYSMD3Q7Z3D4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AGAP12P-201ENST00000585227 2359 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SNORA50C-201ENST00000408535 133 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 FGFR3P1-201ENST00000449999 601 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 MPRIPP1-201ENST00000452433 1089 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 RN7SL81P-201ENST00000493781 261 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AC138894.2-201ENST00000602838 371 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SNORA50.1-201ENST00000628590 135 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AC020763.3-201ENST00000625095 2904 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 PES1P2-201ENST00000449745 1735 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 LINC00638-201ENST00000555578 2518 ntBASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD3Q7Z3D4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms