Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CDK5Q00535 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 COX5BP8-201ENST00000416911 349 ntBASIC12.49□□□□□ -0.41
CDK5Q00535 OR8T1P-201ENST00000421347 918 ntBASIC12.49□□□□□ -0.41
CDK5Q00535 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.49□□□□□ -0.41
CDK5Q00535 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 PCDHB17P-202ENST00000623466 3066 ntBASIC12.49□□□□□ -0.41
CDK5Q00535 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 AC091181.1-201ENST00000623762 2098 ntBASIC12.49□□□□□ -0.41
CDK5Q00535 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.49□□□□□ -0.41
CDK5Q00535 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.49□□□□□ -0.41
CDK5Q00535 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDK5Q00535 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 RBM22P2-201ENST00000393978 1814 ntBASIC12.48□□□□□ -0.41
CDK5Q00535 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.48□□□□□ -0.41
CDK5Q00535 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.48□□□□□ -0.41
CDK5Q00535 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 RN7SL530P-201ENST00000485097 298 ntBASIC12.48□□□□□ -0.41
CDK5Q00535 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.48□□□□□ -0.41
CDK5Q00535 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.48□□□□□ -0.41
CDK5Q00535 SNORD3B-2-202ENST00000571722 791 ntBASIC12.48□□□□□ -0.41
CDK5Q00535 MIR3188-201ENST00000583494 85 ntBASIC12.48□□□□□ -0.41
CDK5Q00535 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.48□□□□□ -0.41
CDK5Q00535 AC022748.3-201ENST00000621828 275 ntBASIC12.48□□□□□ -0.41
CDK5Q00535 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CDK5Q00535 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
CDK5Q00535 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.48□□□□□ -0.41
CDK5Q00535 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDK5Q00535 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 AC008764.8-201ENST00000623966 2717 ntBASIC12.47□□□□□ -0.41
CDK5Q00535 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDK5Q00535 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CDK5Q00535 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms