Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.36□□□□□ -0.11
ERVFC1P60507 AC004466.2-201ENST00000614749 516 ntBASIC14.36□□□□□ -0.11
ERVFC1P60507 AC106782.5-201ENST00000616011 337 ntBASIC14.36□□□□□ -0.11
ERVFC1P60507 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ERVFC1P60507 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1P60507 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.36□□□□□ -0.11
ERVFC1P60507 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.36□□□□□ -0.11
ERVFC1P60507 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.36□□□□□ -0.11
ERVFC1P60507 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1P60507 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1P60507 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ERVFC1P60507 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1P60507 AL008638.4-201ENST00000624792 1315 ntBASIC14.36□□□□□ -0.11
ERVFC1P60507 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ERVFC1P60507 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1P60507 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ERVFC1P60507 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1P60507 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AL513497.1-201ENST00000624273 2083 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 BX640514.1-201ENST00000583223 1918 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 MIR339-201ENST00000362153 94 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 FTH1P18-201ENST00000412071 549 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.35□□□□□ -0.11
ERVFC1P60507 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 RN7SL838P-201ENST00000481676 295 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 AC026412.1-206ENST00000502273 206 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC14.35□□□□□ -0.11
ERVFC1P60507 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AC133555.4-201ENST00000569081 152 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 RN7SL440P-201ENST00000577855 343 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AC008622.3-201ENST00000621170 600 ntBASIC14.35□□□□□ -0.11
ERVFC1P60507 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.35□□□□□ -0.11
ERVFC1P60507 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ERVFC1P60507 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERVFC1P60507 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.35□□□□□ -0.11
ERVFC1P60507 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 MST1P2-201ENST00000457982 2291 ntBASIC14.34□□□□□ -0.11
ERVFC1P60507 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERVFC1P60507 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ERVFC1P60507 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ERVFC1P60507 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.34□□□□□ -0.11
ERVFC1P60507 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.34□□□□□ -0.11
ERVFC1P60507 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms