Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.15□□□□□ -0.78
APOC4P55056 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC10.15□□□□□ -0.78
APOC4P55056 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC10.15□□□□□ -0.78
APOC4P55056 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC10.15□□□□□ -0.78
APOC4P55056 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC10.15□□□□□ -0.78
APOC4P55056 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 BCAS2P2-201ENST00000425064 674 ntBASIC10.15□□□□□ -0.78
APOC4P55056 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC10.15□□□□□ -0.78
APOC4P55056 AC006529.1-201ENST00000459978 637 ntBASIC10.15□□□□□ -0.78
APOC4P55056 AC025186.1-201ENST00000478174 870 ntBASIC10.15□□□□□ -0.78
APOC4P55056 HNRNPA1P56-201ENST00000505767 954 ntBASIC10.15□□□□□ -0.78
APOC4P55056 EEF1GP8-201ENST00000506566 1154 ntBASIC10.15□□□□□ -0.78
APOC4P55056 CTBP2P4-201ENST00000513884 920 ntBASIC10.15□□□□□ -0.78
APOC4P55056 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 AL132994.1-201ENST00000554098 400 ntBASIC10.15□□□□□ -0.78
APOC4P55056 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC10.15□□□□□ -0.78
APOC4P55056 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC10.15□□□□□ -0.78
APOC4P55056 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 AC005041.3-201ENST00000606287 649 ntBASIC10.15□□□□□ -0.78
APOC4P55056 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 AC009084.3-201ENST00000623356 437 ntBASIC10.15□□□□□ -0.78
APOC4P55056 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.15□□□□□ -0.78
APOC4P55056 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
APOC4P55056 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
APOC4P55056 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 AC139749.1-202ENST00000617529 3139 ntBASIC10.15□□□□□ -0.79
APOC4P55056 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 AC093462.1-201ENST00000621167 1683 ntBASIC10.15□□□□□ -0.79
APOC4P55056 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
APOC4P55056 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 AC106827.1-201ENST00000366454 431 ntBASIC10.14□□□□□ -0.79
APOC4P55056 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 EEF1DP2-201ENST00000433698 843 ntBASIC10.14□□□□□ -0.79
APOC4P55056 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC10.14□□□□□ -0.79
APOC4P55056 PIN4P1-201ENST00000451079 396 ntBASIC10.14□□□□□ -0.79
APOC4P55056 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
APOC4P55056 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC10.14□□□□□ -0.79
APOC4P55056 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC10.14□□□□□ -0.79
APOC4P55056 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms