Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GPC3P51654 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GPC3P51654 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 AQP7P5-201ENST00000428759 1049 ntBASIC15.22■□□□□ 0.03
GPC3P51654 AQP7P4-201ENST00000447083 1042 ntBASIC15.22■□□□□ 0.03
GPC3P51654 AC007279.1-201ENST00000448547 837 ntBASIC15.22■□□□□ 0.03
GPC3P51654 AQP7P2-201ENST00000453967 1041 ntBASIC15.22■□□□□ 0.03
GPC3P51654 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.22■□□□□ 0.03
GPC3P51654 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 AC073592.2-201ENST00000623062 780 ntBASIC15.22■□□□□ 0.03
GPC3P51654 AQP7P3-201ENST00000624547 1041 ntBASIC15.22■□□□□ 0.03
GPC3P51654 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 AC105206.1-202ENST00000314927 2368 ntBASIC15.22■□□□□ 0.03
GPC3P51654 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GPC3P51654 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GPC3P51654 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GPC3P51654 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 Z98885.3-201ENST00000624882 1757 ntBASIC15.21■□□□□ 0.03
GPC3P51654 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 AL672207.1-201ENST00000328462 1570 ntBASIC15.21■□□□□ 0.03
GPC3P51654 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.21■□□□□ 0.03
GPC3P51654 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GPC3P51654 AC002472.4-201ENST00000641915 272 ntBASIC15.21■□□□□ 0.03
GPC3P51654 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
GPC3P51654 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.21■□□□□ 0.03
GPC3P51654 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.21■□□□□ 0.03
GPC3P51654 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GPC3P51654 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GPC3P51654 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
GPC3P51654 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
GPC3P51654 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GPC3P51654 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.21■□□□□ 0.02
GPC3P51654 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
GPC3P51654 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC3P51654 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC3P51654 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GPC3P51654 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms