Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC6A9P48067 EIF4HP1-201ENST00000453115 687 ntBASIC12.34□□□□□ -0.43
SLC6A9P48067 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC6A9P48067 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC6A9P48067 RCC2P8-201ENST00000502779 1035 ntBASIC12.34□□□□□ -0.43
SLC6A9P48067 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 AC009779.1-201ENST00000551138 283 ntBASIC12.34□□□□□ -0.43
SLC6A9P48067 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.34□□□□□ -0.43
SLC6A9P48067 SNORD3B-2-202ENST00000571722 791 ntBASIC12.34□□□□□ -0.43
SLC6A9P48067 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 AL132994.2-201ENST00000603120 687 ntBASIC12.34□□□□□ -0.43
SLC6A9P48067 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 AL157813.1-201ENST00000612996 587 ntBASIC12.34□□□□□ -0.43
SLC6A9P48067 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SLC6A9P48067 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SLC6A9P48067 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SLC6A9P48067 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
SLC6A9P48067 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SLC6A9P48067 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SLC6A9P48067 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SLC6A9P48067 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
SLC6A9P48067 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SLC6A9P48067 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
SLC6A9P48067 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 AL133338.1-201ENST00000565695 1517 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.33□□□□□ -0.44
SLC6A9P48067 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.33□□□□□ -0.44
SLC6A9P48067 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SLC6A9P48067 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SLC6A9P48067 DPM3-202ENST00000368399 517 ntBASIC12.33□□□□□ -0.44
SLC6A9P48067 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SLC6A9P48067 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SLC6A9P48067 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms