Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 AC019294.4-201ENST00000561777 2905 ntBASIC14.86□□□□□ -0.03
SSR1P43307 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SSR1P43307 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR1P43307 AC068760.1-201ENST00000493579 1953 ntBASIC14.86□□□□□ -0.03
SSR1P43307 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 OR8S1-201ENST00000310194 1080 ntBASIC14.86□□□□□ -0.03
SSR1P43307 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.86□□□□□ -0.03
SSR1P43307 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.86□□□□□ -0.03
SSR1P43307 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR1P43307 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.86□□□□□ -0.03
SSR1P43307 POM121L10P-201ENST00000436994 1285 ntBASIC14.86□□□□□ -0.03
SSR1P43307 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.86□□□□□ -0.03
SSR1P43307 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
SSR1P43307 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
SSR1P43307 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR1P43307 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.86□□□□□ -0.03
SSR1P43307 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 MARK2P9-201ENST00000430958 1727 ntBASIC14.86□□□□□ -0.03
SSR1P43307 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SSR1P43307 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.86□□□□□ -0.03
SSR1P43307 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSR1P43307 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SSR1P43307 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.85□□□□□ -0.03
SSR1P43307 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.85□□□□□ -0.03
SSR1P43307 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.85□□□□□ -0.03
SSR1P43307 AC005695.3-201ENST00000614522 232 ntBASIC14.85□□□□□ -0.03
SSR1P43307 AP000346.4-201ENST00000614827 381 ntBASIC14.85□□□□□ -0.03
SSR1P43307 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SSR1P43307 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SSR1P43307 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.85□□□□□ -0.03
SSR1P43307 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 NUTM2HP-201ENST00000442076 2498 ntBASIC14.85□□□□□ -0.03
SSR1P43307 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSR1P43307 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.85□□□□□ -0.03
SSR1P43307 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SSR1P43307 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SSR1P43307 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms