Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HTR1EP28566 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
HTR1EP28566 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.33□□□□□ -0.28
HTR1EP28566 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1EP28566 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1EP28566 RNMTL1P1-201ENST00000454103 560 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 AC104784.1-201ENST00000473096 294 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1EP28566 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1EP28566 RN7SL163P-201ENST00000583100 276 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.33□□□□□ -0.28
HTR1EP28566 AC132192.2-201ENST00000596206 1147 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 AP000346.4-201ENST00000614827 381 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 AC022748.3-201ENST00000621828 275 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 AL591471.1-201ENST00000621855 229 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HTR1EP28566 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HTR1EP28566 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HTR1EP28566 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HTR1EP28566 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 AC092053.3-201ENST00000641308 4975 ntBASIC13.33□□□□□ -0.28
HTR1EP28566 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.33□□□□□ -0.28
HTR1EP28566 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HTR1EP28566 Z98885.3-201ENST00000624882 1757 ntBASIC13.32□□□□□ -0.28
HTR1EP28566 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HTR1EP28566 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 VENTXP1-201ENST00000569334 2716 ntBASIC13.32□□□□□ -0.28
HTR1EP28566 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.32□□□□□ -0.28
HTR1EP28566 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.32□□□□□ -0.28
HTR1EP28566 AC006335.1-201ENST00000445200 547 ntBASIC13.32□□□□□ -0.28
HTR1EP28566 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 AC140658.4-201ENST00000561990 352 ntBASIC13.32□□□□□ -0.28
HTR1EP28566 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.32□□□□□ -0.28
HTR1EP28566 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
HTR1EP28566 AC004923.1-202ENST00000642106 209 ntBASIC13.32□□□□□ -0.28
HTR1EP28566 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.32□□□□□ -0.28
HTR1EP28566 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HTR1EP28566 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HTR1EP28566 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.32□□□□□ -0.28
HTR1EP28566 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HTR1EP28566 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
HTR1EP28566 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HTR1EP28566 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
HTR1EP28566 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HTR1EP28566 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HTR1EP28566 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HTR1EP28566 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms