Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 TNRC18P1-201ENST00000502875 3650 ntBASIC16.04■□□□□ 0.16
ATP2B1P20020 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 AC093462.1-201ENST00000621167 1683 ntBASIC16.04■□□□□ 0.16
ATP2B1P20020 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP2B1P20020 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ATP2B1P20020 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP2B1P20020 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP2B1P20020 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 RPSAP15-201ENST00000448168 861 ntBASIC16.03■□□□□ 0.16
ATP2B1P20020 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ATP2B1P20020 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATP2B1P20020 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 AL133338.1-201ENST00000565695 1517 ntBASIC16.03■□□□□ 0.16
ATP2B1P20020 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 KRT8P43-201ENST00000406052 1458 ntBASIC16.03■□□□□ 0.16
ATP2B1P20020 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP2B1P20020 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ATP2B1P20020 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP2B1P20020 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP2B1P20020 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP2B1P20020 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
ATP2B1P20020 BX679664.3-201ENST00000414070 555 ntBASIC16.02■□□□□ 0.16
ATP2B1P20020 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ATP2B1P20020 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP2B1P20020 AC026320.2-201ENST00000434379 478 ntBASIC16.02■□□□□ 0.16
ATP2B1P20020 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 AC113935.1-201ENST00000471722 555 ntBASIC16.02■□□□□ 0.16
ATP2B1P20020 AC008723.1-201ENST00000506922 207 ntBASIC16.02■□□□□ 0.16
ATP2B1P20020 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP2B1P20020 AC024681.1-201ENST00000521917 487 ntBASIC16.02■□□□□ 0.16
ATP2B1P20020 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP2B1P20020 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP2B1P20020 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 AP001505.2-201ENST00000616815 443 ntBASIC16.02■□□□□ 0.16
ATP2B1P20020 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP2B1P20020 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ATP2B1P20020 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP2B1P20020 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ATP2B1P20020 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ATP2B1P20020 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP2B1P20020 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP2B1P20020 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.02■□□□□ 0.15
ATP2B1P20020 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms