Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.55■□□□□ 0.24
POLR3DP05423 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.55■□□□□ 0.24
POLR3DP05423 AC093300.1-201ENST00000510368 1201 ntBASIC16.55■□□□□ 0.24
POLR3DP05423 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.55■□□□□ 0.24
POLR3DP05423 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR3DP05423 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR3DP05423 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.55■□□□□ 0.24
POLR3DP05423 AL139424.3-202ENST00000641619 917 ntBASIC16.55■□□□□ 0.24
POLR3DP05423 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
POLR3DP05423 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
POLR3DP05423 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
POLR3DP05423 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.54■□□□□ 0.24
POLR3DP05423 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
POLR3DP05423 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.54■□□□□ 0.24
POLR3DP05423 PES1P2-201ENST00000449745 1735 ntBASIC16.54■□□□□ 0.24
POLR3DP05423 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.54■□□□□ 0.24
POLR3DP05423 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 GNG10P1-201ENST00000452289 199 ntBASIC16.54■□□□□ 0.24
POLR3DP05423 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.54■□□□□ 0.24
POLR3DP05423 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 AL118522.1-201ENST00000611368 560 ntBASIC16.54■□□□□ 0.24
POLR3DP05423 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
POLR3DP05423 LINC00431-202ENST00000636375 159 ntBASIC16.54■□□□□ 0.24
POLR3DP05423 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
POLR3DP05423 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
POLR3DP05423 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
POLR3DP05423 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
POLR3DP05423 AC126335.2-201ENST00000623362 4637 ntBASIC16.54■□□□□ 0.24
POLR3DP05423 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 CTBP2P8-201ENST00000422584 1330 ntBASIC16.53■□□□□ 0.24
POLR3DP05423 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
POLR3DP05423 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 AC073869.1-201ENST00000415574 2762 ntBASIC16.53■□□□□ 0.24
POLR3DP05423 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 AC005722.1-201ENST00000431878 964 ntBASIC16.53■□□□□ 0.24
POLR3DP05423 EEF1DP2-201ENST00000433698 843 ntBASIC16.53■□□□□ 0.24
POLR3DP05423 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR3DP05423 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
POLR3DP05423 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR3DP05423 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.53■□□□□ 0.24
POLR3DP05423 MIR5196-201ENST00000578146 115 ntBASIC16.53■□□□□ 0.24
POLR3DP05423 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.53■□□□□ 0.24
POLR3DP05423 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.53■□□□□ 0.24
POLR3DP05423 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms