Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 AGGF1P10-201ENST00000635005 2191 ntBASIC11.14□□□□□ -0.63
UPK2O00526 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
UPK2O00526 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
UPK2O00526 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
UPK2O00526 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.13□□□□□ -0.63
UPK2O00526 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
UPK2O00526 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.13□□□□□ -0.63
UPK2O00526 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 KRT17P5-201ENST00000332088 839 ntBASIC11.13□□□□□ -0.63
UPK2O00526 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.13□□□□□ -0.63
UPK2O00526 AC005722.1-201ENST00000431878 964 ntBASIC11.13□□□□□ -0.63
UPK2O00526 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 CD81-209ENST00000492627 886 ntTSL 3 BASIC11.13□□□□□ -0.63
UPK2O00526 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.13□□□□□ -0.63
UPK2O00526 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.13□□□□□ -0.63
UPK2O00526 AC044849.1-201ENST00000519737 1188 ntBASIC11.13□□□□□ -0.63
UPK2O00526 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.13□□□□□ -0.63
UPK2O00526 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.13□□□□□ -0.63
UPK2O00526 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.13□□□□□ -0.63
UPK2O00526 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 AC040160.2-201ENST00000623816 1675 ntBASIC11.13□□□□□ -0.63
UPK2O00526 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UPK2O00526 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
UPK2O00526 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
UPK2O00526 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.13□□□□□ -0.63
UPK2O00526 RCC2P5-201ENST00000492126 1487 ntBASIC11.12□□□□□ -0.63
UPK2O00526 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 TUBB1P2-201ENST00000422712 1306 ntBASIC11.12□□□□□ -0.63
UPK2O00526 TUBB1P1-201ENST00000503144 1300 ntBASIC11.12□□□□□ -0.63
UPK2O00526 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
UPK2O00526 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UPK2O00526 AL031719.1-201ENST00000623365 2587 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms