Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20BQ9P0W2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 MIR3940-201ENST00000579148 102 ntBASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 TRMT112P3-201ENST00000580149 358 ntBASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AL451007.2-201ENST00000632004 563 ntBASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 RCC2P5-201ENST00000492126 1487 ntBASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20BQ9P0W2 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AC020763.3-201ENST00000625095 2904 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 RN7SL396P-201ENST00000471086 295 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 KRT18P37-201ENST00000520711 1282 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AC006158.1-201ENST00000610661 249 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 MIR8071-1-201ENST00000616769 65 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 MIR8071-2-201ENST00000616772 65 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 AF013593.1-201ENST00000458074 1487 ntBASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20BQ9P0W2 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HMG20BQ9P0W2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms