Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SNORA50C-201ENST00000408535 133 ntBASIC14.09□□□□□ -0.15
HACD3Q9P035 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.09□□□□□ -0.15
HACD3Q9P035 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.09□□□□□ -0.15
HACD3Q9P035 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.09□□□□□ -0.15
HACD3Q9P035 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.09□□□□□ -0.15
HACD3Q9P035 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
HACD3Q9P035 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HACD3Q9P035 SNORA50.1-201ENST00000628590 135 ntBASIC14.09□□□□□ -0.15
HACD3Q9P035 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 AC025183.3-201ENST00000623526 1482 ntBASIC14.09□□□□□ -0.15
HACD3Q9P035 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.09□□□□□ -0.15
HACD3Q9P035 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.09□□□□□ -0.15
HACD3Q9P035 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 NCLP1-201ENST00000445357 1963 ntBASIC14.09□□□□□ -0.15
HACD3Q9P035 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HACD3Q9P035 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.09□□□□□ -0.15
HACD3Q9P035 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.08□□□□□ -0.15
HACD3Q9P035 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.08□□□□□ -0.15
HACD3Q9P035 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HACD3Q9P035 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.08□□□□□ -0.15
HACD3Q9P035 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 AC093462.1-201ENST00000621167 1683 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 MKRN5P-201ENST00000445263 1467 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 CES1P1-201ENST00000421606 1704 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 AC004241.5-201ENST00000623870 2448 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HACD3Q9P035 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
HACD3Q9P035 AL662890.1-201ENST00000396818 632 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 AP000358.1-201ENST00000456260 156 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.08□□□□□ -0.16
HACD3Q9P035 RTN3P1-201ENST00000536295 711 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HACD3Q9P035 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.08□□□□□ -0.16
HACD3Q9P035 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.08□□□□□ -0.16
HACD3Q9P035 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.08□□□□□ -0.16
HACD3Q9P035 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.08□□□□□ -0.16
HACD3Q9P035 RN7SL665P-201ENST00000578793 300 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.08□□□□□ -0.16
HACD3Q9P035 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
HACD3Q9P035 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HACD3Q9P035 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 TEKT4P2-202ENST00000559466 1312 ntBASIC14.08□□□□□ -0.16
HACD3Q9P035 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
HACD3Q9P035 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HACD3Q9P035 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.08□□□□□ -0.16
HACD3Q9P035 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.08□□□□□ -0.16
HACD3Q9P035 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms