Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 AP000354.1-201ENST00000396982 456 ntBASIC13.09□□□□□ -0.31
FAM60AQ9NP50 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 PSAT1P2-201ENST00000426107 972 ntBASIC13.09□□□□□ -0.31
FAM60AQ9NP50 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 TREHP1-201ENST00000531328 465 ntBASIC13.09□□□□□ -0.31
FAM60AQ9NP50 BAK1P2-201ENST00000532665 631 ntBASIC13.09□□□□□ -0.31
FAM60AQ9NP50 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.09□□□□□ -0.31
FAM60AQ9NP50 AC026120.2-201ENST00000617239 309 ntBASIC13.09□□□□□ -0.31
FAM60AQ9NP50 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.09□□□□□ -0.31
FAM60AQ9NP50 DDC-212ENST00000615193 1674 ntTSL 3 BASIC13.08□□□□□ -0.31
FAM60AQ9NP50 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
FAM60AQ9NP50 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
FAM60AQ9NP50 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
FAM60AQ9NP50 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.08□□□□□ -0.31
FAM60AQ9NP50 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 ZNF493-208ENST00000599461 1769 ntBASIC13.08□□□□□ -0.32
FAM60AQ9NP50 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 GCSHP3-201ENST00000431120 391 ntBASIC13.08□□□□□ -0.32
FAM60AQ9NP50 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.08□□□□□ -0.32
FAM60AQ9NP50 AC008972.2-201ENST00000606587 494 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms