Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 ACTG1P17-201ENST00000558391 1119 ntBASIC14.31□□□□□ -0.12
HDAC11Q96DB2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 MIR6787-201ENST00000616675 61 ntBASIC14.31□□□□□ -0.12
HDAC11Q96DB2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 AF013593.1-201ENST00000458074 1487 ntBASIC14.31□□□□□ -0.12
HDAC11Q96DB2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.31□□□□□ -0.12
HDAC11Q96DB2 TBC1D27-202ENST00000424239 1573 ntBASIC14.3□□□□□ -0.12
HDAC11Q96DB2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AC020658.7-201ENST00000624274 2442 ntBASIC14.3□□□□□ -0.12
HDAC11Q96DB2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 KLF17P1-201ENST00000547105 1126 ntBASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AC242376.1-201ENST00000559033 726 ntBASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AC020922.3-201ENST00000595064 547 ntBASIC14.3□□□□□ -0.12
HDAC11Q96DB2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.3□□□□□ -0.12
HDAC11Q96DB2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 DGCR9-201ENST00000609630 2415 ntBASIC14.29□□□□□ -0.12
HDAC11Q96DB2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HDAC11Q96DB2 MIR557-201ENST00000385239 98 ntBASIC14.29□□□□□ -0.12
HDAC11Q96DB2 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms