Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RN7SL258P-201ENST00000478664 300 ntBASIC13□□□□□ -0.33
NUP43Q8NFH3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13□□□□□ -0.33
NUP43Q8NFH3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
NUP43Q8NFH3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13□□□□□ -0.33
NUP43Q8NFH3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NUP43Q8NFH3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NUP43Q8NFH3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AC040160.2-201ENST00000623816 1675 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PPP1R2P4-201ENST00000424051 595 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PDIA3P2-201ENST00000428073 158 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 COQ10BP2-201ENST00000513804 724 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AC026803.1-201ENST00000569130 274 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AC244093.1-201ENST00000610837 814 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 AC245140.2-201ENST00000624054 1939 ntBASIC12.99□□□□□ -0.33
NUP43Q8NFH3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NUP43Q8NFH3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NUP43Q8NFH3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms