Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 AL591846.1-201ENST00000451736 433 ntBASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 AL023803.2-201ENST00000620080 638 ntBASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 TNRC18P1-201ENST00000502875 3650 ntBASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN22Q8N7P3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 MIR193BHG-211ENST00000641433 5365 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TUBB2BP1-201ENST00000404155 871 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC078875.1-201ENST00000431907 724 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC090164.2-201ENST00000611487 516 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC068587.8-201ENST00000641239 219 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC004923.1-202ENST00000642106 209 ntBASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CLDN22Q8N7P3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
CLDN22Q8N7P3 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms