Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AC125807.2-201ENST00000513358 3514 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 AC004899.1-201ENST00000424687 1714 ntBASIC14.75□□□□□ -0.05
CCDC50Q8IVM0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AC011481.3-201ENST00000623895 5594 ntBASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 BX324167.2-201ENST00000623717 3316 ntBASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 CICP1-201ENST00000416803 2410 ntBASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 KRT223P-202ENST00000449164 1292 ntBASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AP005482.1-201ENST00000563722 1273 ntBASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC50Q8IVM0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 RN7SL277P-201ENST00000481521 288 ntBASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AC005324.6-201ENST00000587972 613 ntBASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AP000346.4-201ENST00000614827 381 ntBASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 AL096828.3-201ENST00000615354 462 ntBASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 LINC01815-202ENST00000641468 1409 ntBASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 FMO6P-201ENST00000236166 1620 ntBASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC50Q8IVM0 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms